Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908014.1_cds_XP_016458165.1_51818
CDS Infomation

[gene=LOC107781868] [db_xref=GeneID:107781868] [protein=peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like isoform X6] [protein_id=XP_016458165.1] [location=complement(join(72174..72258,72337..72471,73046..73148,89366..89426,89552..90313,90400..90487,91039..91098,91180..91235,92576..92662,92725..92779,93349..93462,95825..95907,96610..96696,97233..97313))] [gbkey=CDS]
Sequence

ATGATGCAGCAGTTTGTTGCTAGTGAAAATAAGGAGCAAGTTGAACAGCGGATACGGCCA
TATGTTAATCAAGTTCTAATGTATGAAGATCTGCATCGGCAAGAAATGGCTCGAAAGACG
GTTCCTGTGGACAAGCTTGAGGAGAAAGCATTGATTTCTTTGGGAAGGGAGGGAAACTTG
AGACCATCAAAAGTTGAACAAGATAATGCTTTCCTATTACAACTGCTATTCTGGTTTAAA
CAATCATTCAGGTGGGTAAATGCGCCTCCTTGTGATAGTTGTGGTAATGAAACCAGAAGT
CAAGGCATGGGAGTTGCAAATTCTTCTGAAACACAATATGGTGCTTCACGAGTTGAACTT
TATCGCTGCAATTCATGTTCAAATATCACCCGTTTCCCAAGATACAATGACCCATTGAAG
CTTCTTGAGACAAGAAAGGGGCGGTGCGGGGAATGGGCCAACTGCTTCACGCTCTATTGT
AAGGCTTTTGGTTATGATTCTCGTTTGATTCTGGACTTCACTGATCATGTCTGGACAGAG
TGCTTTTCACCATCTCTGGGAAGATGGATGCATCTTGATCCTTGTGAAGGAATATATGAC
AATCCTCTTTTATATGAGAAGGGATGGAAAAAGAATTTGAACTATGTGATTGCTATTGCA
AAAGATGGTGTGCATGACGTCACTAAGCGTTACACCAGGAAGTGGCCTGAGGTTCTTTCT
CGGCGAAACATCACCTCAGAGCCTGCTCTCTCTGCTGTTCTTTCTGATATAACTAGGGAA
CTGCAGAAAAAATTATCTGCTGAAGTGATTTCAGCACTGGAAGATCGGGACAGAACCGAA
ATGGATGTCATTGAGCGAGAATTGTATTCTAAAGATGATGCTGTAGTCTCATTACCTGGA
AGACTGAGTGGAGATAAGGAGTGGCGCATAGCAAGATCGGAATTTGTCTCTGATGAAAAG
AACTCTCTAAGCTCTTCATTTTGTCCAGTTCGCAGATGCGTAGATGATCATGTTACAAAG
ATCTACAGTGCCTTTTCCCCTGTTCTTACAAAGTTAATAGAGTACTCGCCCTCTAAAACA
ACAGCTATTCAAGTTCTTGAGATTTTCAGAAAGATATTGGTTGATCTAAAGAGTTCCCCT
TTCCGAACCAGGAGAACCTCTGTGAAATCAGTTTCAAGTAGTTCTGGTGAAATTTTCAGT
AAGACGTTGGCATCTTTCGGCCAGTTACTTGATGCTCTTTCTTTGAAGAGTGAGTTAGGT
TCAAATGGGAGTATTGATATAAGTTTAGCTTCTGATCCTGTTAAAACTTCTGTTGCTCTG
CCTGTCGTGTTCCACGCAGTGGATGATGTGATTTACAATGTTGGACAATGTGCTAGACTA
GATAGCAGGTCCCTCGCTTGGCCACTGCTTAAGTTGAACAGATTATGTTCTGGTCTAGTC
CTTGCTAGCGGGGAGGAGCTTCCTTTTGGAATTGCTACATGTGCATTTGATGGAACACGG
ATGTCAAAGTGGGAAGAACCAAATGGTGCAGCAGGTTGTTGGATCATATATCAAGTAGCT
GGTAACCGGATGTTTGAGCTTGTGGCATATGAGTTAATGTCTGCTAATGATGCTCCAGAG
AGAGATCCAAAAGACTGGGTGCTAGAAGGAAGTGAAAACGGAGGTTCCAGCTGGCATCTC
TTGGATAAACAAACTTCCCAGATGTTCGACAAACGTTTCCAAAGAAAAACATTTACAGTT
AGTTCACCAGGCTATTTGGCAAATGCATTCAGGCTAAGGTTTCTAGCAGTTCGAGATGCG
AATGCAAATTCAAGGTTTCAGATTGGCAGCATTGACCTCTATGCAAGCAGCAGTTGA

Peptide Sequence

PEP ID

XP_016458165.1
PEP Infomation

PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like isoform X6 [Nicotiana tabacum]
Sequence

MMQQFVASENKEQVEQRIRPYVNQVLMYEDLHRQEMARKTVPVDKLEEKALISLGREGNL
RPSKVEQDNAFLLQLLFWFKQSFRWVNAPPCDSCGNETRSQGMGVANSSETQYGASRVEL
YRCNSCSNITRFPRYNDPLKLLETRKGRCGEWANCFTLYCKAFGYDSRLILDFTDHVWTE
CFSPSLGRWMHLDPCEGIYDNPLLYEKGWKKNLNYVIAIAKDGVHDVTKRYTRKWPEVLS
RRNITSEPALSAVLSDITRELQKKLSAEVISALEDRDRTEMDVIERELYSKDDAVVSLPG
RLSGDKEWRIARSEFVSDEKNSLSSSFCPVRRCVDDHVTKIYSAFSPVLTKLIEYSPSKT
TAIQVLEIFRKILVDLKSSPFRTRRTSVKSVSSSSGEIFSKTLASFGQLLDALSLKSELG
SNGSIDISLASDPVKTSVALPVVFHAVDDVIYNVGQCARLDSRSLAWPLLKLNRLCSGLV
LASGEELPFGIATCAFDGTRMSKWEEPNGAAGCWIIYQVAGNRMFELVAYELMSANDAPE
RDPKDWVLEGSENGGSSWHLLDKQTSQMFDKRFQRKTFTVSSPGYLANAFRLRFLAVRDA
NANSRFQIGSIDLYASSS

Transcript Sequence

Gene sequence data has not been registered.